Antimicrobial peptide: AMP10.001_280

Quality badge cannot be shown. Please check your internet connection.     Quality badge cannot be shown. Please check your internet connection.     Quality badge cannot be shown. Please check your internet connection.     Quality badge cannot be shown. Please check your internet connection.     Quality badge cannot be shown. Please check your internet connection.   
The AMP belongs to SPHERE-III.008_702 family and has 39 amino acid residues.
Peptide sequence
LYVGIDVAKNKHDVTALNVRGKLFLNHSLFQIIKLVLNY
Co-prediction
Predictor
Value
APIN
0.00
AMPScanner2
0.04
AMPlify
0.56
ampir
0.28
amPEPpy
0.55
AI4AMP
0.04
Macrel
0.63

All peptides in the AMPSphere were predicted by Macrel (p > 0.5), but were subsequently run through several additional predictors (shown above)


Distribution
Habitats
510251002Progenomeshuman respiratory tract
# smORF genes (log scale)

Some environment names may be hidden due to space limits.
Use your cursor to zoom in.

Microbial sources
510251002Streptococcus pneumoniaeothers *
# smORF genes (log scale)

Others *: Also including unknown microbial sources at species level.


Relationships
Gene
Gene sequense
Sample/Genome
Habitat
Microbial source
GMSC10.SMORF.000_000_280_940
CTAATAGTTCAAAACCAGCTTTATTATTTGAAAAAGTGAGTGGTTTAAGAACAGTTTTCCTCGAACATTCAAGGCTGTAACATCGTGTTTATTTTTAGCGACATCAATGCCCACATAAAGCAT
1313.SAMEA1028913
Progenomes
Streptococcus pneumoniae
GMSC10.SMORF.000_008_621_808
CTAATAGTTCAAAACCAGCTTTATTATTTGAAAAAGTGAGTGGTTTAAGAACAGTTTTCCTCGAACATTCAAGGCTGTAACATCGTGTTTATTTTTAGCGACATCAATGCCCACATAAAGCAT
1001746.SAMN02472137
Progenomes
Streptococcus pneumoniae
GMSC10.SMORF.000_008_621_911
CTAATAGTTCAAAACCAGCTTTATTATTTGAAAAAGTGAGTGGTTTAAGAACAGTTTTCCTCGAACATTCAAGGCTGTAACATCGTGTTTATTTTTAGCGACATCAATGCCCACATAAAGCAT
1001747.SAMN02472133
Progenomes
Streptococcus pneumoniae
GMSC10.SMORF.000_015_804_822
CTAATAGTTCAAAACCAGCTTTATTATTTGAAAAAGTGAGTGGTTTAAGAACAGTTTTCCTCGAACATTCAAGGCTGTAACATCGTGTTTATTTTTAGCGACATCAATGCCCACATAAAGCAT
406562.SAMN02393749
Progenomes
Streptococcus pneumoniae
GMSC10.SMORF.000_016_084_229
CTAATAGTTCAAAACCAGCTTTATTATTTGAAAAAGTGAGTGGTTTAAGAACAGTTTTCCTCGAACATTCAAGGCTGTAACATCGTGTTTATTTTTAGCGACATCAATGCCCACATAAAGCAT
760835.SAMN00792664
Progenomes
Streptococcus pneumoniae
Total 272
5/page
  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
  • 55
Go to