Name | Type | URL | Description |
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AMPSphere database | Full database | Full sqlite3 database containing all individual tables below. | |
AMP | Individual table | All AMP families and sequences. | |
GMSC and Metadata | Individual table | All AMP-associated smORF genes, sequences and associated metadata (microbial source, habitats, etc.). | |
MMseqs database | Search database | Search database for offline or large scale query, can be directly used by the MMseqs software. | |
HMM profile database | Search database | Search database for offline or large scale query, can be directly used by the HMMER software. | |
AMP density per species and sample | Individual table | AMP density data accounting only for contigs with taxonomy in the metagenome samples. |