Antimicrobial peptide: AMP10.001_279

Quality badge cannot be shown. Please check your internet connection.     Quality badge cannot be shown. Please check your internet connection.     Quality badge cannot be shown. Please check your internet connection.     Quality badge cannot be shown. Please check your internet connection.     Quality badge cannot be shown. Please check your internet connection.   
The AMP belongs to SPHERE-III.008_702 family and has 39 amino acid residues.
Peptide sequence
LYVGIDIAKNKHDVTALNVRGKLFLNHSLFQIIKLVLNS
Co-prediction
Predictor
Value
APIN
0.00
AMPScanner2
0.01
AMPlify
0.57
ampir
0.30
amPEPpy
0.56
AI4AMP
0.06
Macrel
0.61

All peptides in the AMPSphere were predicted by Macrel (p > 0.5), but were subsequently run through several additional predictors (shown above)


Distribution
Habitats
10251002Progenomeshuman respiratory tract
# smORF genes (log scale)

Some environment names may be hidden due to space limits.
Use your cursor to zoom in.

Microbial sources
510251002Streptococcus pneumoniaeothers *
# smORF genes (log scale)

Others *: Also including unknown microbial sources at species level.


Relationships
Gene
Gene sequense
Sample/Genome
Habitat
Microbial source
GMSC10.SMORF.000_020_390_127
ATGCTTTATGTGGGCATTGATATCGCTAAAAATAAACACGATGTTACAGCCTTGAATGTTCGAGGAAAACTGTTCTTAAACCACTCACTTTTTCAAATAATAAAGCTGGTTTTGAACTCTTAG
1313.SAMEA1024989
Progenomes
Streptococcus pneumoniae
GMSC10.SMORF.000_020_416_387
ATGCTTTATGTGGGCATTGATATCGCTAAAAATAAACACGATGTTACAGCCTTGAATGTTCGAGGAAAACTGTTCTTAAACCACTCACTTTTTCAAATAATAAAGCTGGTTTTGAACTCTTAG
1313.SAMEA1029103
Progenomes
Streptococcus pneumoniae
GMSC10.SMORF.000_020_416_388
ATGCTTTATGTGGGCATTGATATCGCTAAAAATAAACACGATGTTACAGCCTTGAATGTTCGAGGAAAACTGTTCTTAAACCACTCACTTTTTCAAATAATAAAGCTGGTTTTGAACTCTTAG
1313.SAMEA1029103
Progenomes
Streptococcus pneumoniae
GMSC10.SMORF.000_020_431_108
ATGCTTTATGTGGGCATTGATATCGCTAAAAATAAACACGATGTTACAGCCTTGAATGTTCGAGGAAAACTGTTCTTAAACCACTCACTTTTTCAAATAATAAAGCTGGTTTTGAACTCTTAG
1313.SAMEA1024900
Progenomes
Streptococcus pneumoniae
GMSC10.SMORF.000_020_431_110
ATGCTTTATGTGGGCATTGATATCGCTAAAAATAAACACGATGTTACAGCCTTGAATGTTCGAGGAAAACTGTTCTTAAACCACTCACTTTTTCAAATAATAAAGCTGGTTTTGAACTCTTAG
1313.SAMEA1024900
Progenomes
Streptococcus pneumoniae
Total 272
5/page
  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
  • 55
Go to