Home
Browse
About
Downloads
Contact
Antimicrobial peptide: AMP10.000_081

Quality badge cannot be shown. Please check your internet connection.     Quality badge cannot be shown. Please check your internet connection.     Quality badge cannot be shown. Please check your internet connection.     Quality badge cannot be shown. Please check your internet connection.     Quality badge cannot be shown. Please check your internet connection.   
The AMP belongs to SPHERE-III.010_694 family and has 43 amino acid residues.
Peptide sequence
QDLSSEDKKIPPKNYQKQPKNYPRIVFGHKNVGFPPIGFQKFT
Co-prediction
Predictor
Value
APIN
0.00
AMPScanner2
0.10
AMPlify
0.86
ampir
0.86
amPEPpy
0.76
AI4AMP
0.20
Macrel
0.55

All peptides in the AMPSphere were predicted by Macrel (p > 0.5), but were subsequently run through several additional predictors (shown above)

Distribution
Habitats
1101001000human gutProgenomescattle gutwastewaterrat gutpig gutchicken gutdog gut
# smORF genes (log scale)

Some environment names may be hidden due to space limits.
Use your cursor to zoom in.

Microbial sources
12510251002510002Bacteroides xylanisolvensBacteroides sp003463205Bacteroides thetaiotaomicronBacteroides ovatusBacteroides finegoldiiBacteroides caccaeBacteroides stercorisBacteroides faecisPhocaeicola vulgatusothers *
# smORF genes (log scale)

Others *: Also including unknown microbial sources at species level.

Relationships
Gene
Gene sequense
Sample/Genome
Habitat
Microbial source
GMSC10.SMORF.000_000_145_091
ATGCAGGATTTAAGTTCAGAAGATAAAAAAATACCACCCAAAAACTATCAAAAACAACCTAAAAACTATCCGCGGATAGTTTTCGGGCATAAAAACGTCGGATTTCCCCCTATCGGGTTTCAGAAATTCACGTAA
469590.SAMN02463692
Progenomes
Bacteroides ovatus
GMSC10.SMORF.000_001_373_866
ATGCAGGATTTAAGTTCAGAAGATAAAAAAATACCACCCAAAAACTATCAAAAACAACCTAAAAACTATCCGCGGATAGTTTTCGGGCATAAAAACGTCGGATTTCCCCCTATCGGGTTTCAGAAATTCACGTAA
556258.SAMN02463696
Progenomes
Bacteroides xylanisolvens
GMSC10.SMORF.000_001_483_426
ATGCAGGATTTAAGTTCAGAAGATAAAAAAATACCACCCAAAAACTATCAAAAACAACCTAAAAACTATCCGCGGATAGTTTTCGGGCATAAAAACGTCGGATTTCCCCCTATCGGGTTTCAGAAATTCACGTAA
469588.SAMN02463734
Progenomes
Bacteroides xylanisolvens
GMSC10.SMORF.000_001_508_690
TTACGTGAATTTCTGAAACCCGATAGGGGGAAATCCGACGTTTTTATGCCCGAAAACTATCCGCGGATAGTTTTTAGGTTGTTTTTGATAGTTTTTGGGTGGTATTTTTTTATCTTCTGAACTTAAATCCTGCAT
585544.SAMN02463819
Progenomes
Bacteroides xylanisolvens
GMSC10.SMORF.000_001_703_113
TTACGTGAATTTCTGAAACCCGATAGGGGGAAATCCGACGTTTTTATGCCCGAAAACTATCCGCGGATAGTTTTTAGGTTGTTTTTGATAGTTTTTGGGTGGTATTTTTTTATCTTCTGAACTTAAATCCTGCAT
657309.SAMEA3138363
Progenomes
Bacteroides xylanisolvens
Total 2597
5/page
  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
  • 520
Go to