Antimicrobial peptide: AMP10.000_063

Quality badge cannot be shown. Please check your internet connection.     Quality badge cannot be shown. Please check your internet connection.     Quality badge cannot be shown. Please check your internet connection.     Quality badge cannot be shown. Please check your internet connection.     Quality badge cannot be shown. Please check your internet connection.   
The AMP belongs to SPHERE-III.005_182 family and has 37 amino acid residues.
Peptide sequence
RTEIKTYTTADKMMMTGSMCGMMCMCCMGRFRVRKDI
Co-prediction
Predictor
Value
APIN
1.00
AMPScanner2
0.47
AMPlify
0.09
ampir
0.53
amPEPpy
0.66
AI4AMP
0.03
Macrel
0.75

All peptides in the AMPSphere were predicted by Macrel (p > 0.5), but were subsequently run through several additional predictors (shown above)


Distribution
Habitats
1101001000human gutProgenomesactivated sludgewastewater
# smORF genes (log scale)

Some environment names may be hidden due to space limits.
Use your cursor to zoom in.

Microbial sources
1101001000Roseburia intestinalisRoseburia sp003470905Roseburia sp900550935UBA7182 sp003481535Enterocloster sp000431375others *
# smORF genes (log scale)

Others *: Also including unknown microbial sources at species level.


Relationships
Gene
Gene sequense
Sample/Genome
Habitat
Microbial source
GMSC10.SMORF.000_000_065_207
TCAGATATCTTTCCGCACACGAAATCGTCCCATACAGCACATACACATCATGCCGCACATGGATCCTGTCATCATCATTTTGTCTGCTGTTGTATAGGTCTTAATTTCTGTACGCAT
1263104.PRJEB708
Progenomes
Roseburia intestinalis
GMSC10.SMORF.000_001_366_667
TCAGATATCTTTCCGCACACGAAATCGTCCCATACAGCACATACACATCATGCCGCACATGGATCCTGTCATCATCATTTTGTCTGCTGTTGTATAGGTCTTAATTTCTGTACGCAT
536231.SAMN00008856
Progenomes
Roseburia intestinalis
GMSC10.SMORF.000_001_701_520
ATGCGTACAGAAATTAAGACCTATACAACAGCAGACAAAATGATGATGACAGGATCCATGTGCGGCATGATGTGTATGTGCTGTATGGGACGATTTCGTGTGCGGAAAGATATCTGA
657315.SAMEA3138359
Progenomes
Roseburia intestinalis
GMSC10.SMORF.000_001_708_835
ATGCGTACAGAAATTAAGACCTATACAACAGCAGACAAAATGATGATGACAGGATCCATGTGCGGCATGATGTGTATGTGCTGTATGGGACGATTTCGTGTGCGGAAAGATATCTGA
718255.SAMEA3138374
Progenomes
Roseburia intestinalis
GMSC10.SMORF.000_025_095_774
ATGCGTACAGAAATTAAGACCTATACAACAGCAGACAAAATGATGATGACAGGATCCATGTGCGGCATGATGTGTATGTGCTGTATGGGACGATTTCGTGTGCGGAAAGATATCTGA
166486.SAMEA3545423
Progenomes
Roseburia intestinalis
Total 3181
5/page
  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
  • 637
Go to