Antimicrobial peptide: AMP10.000_029

Quality badge cannot be shown. Please check your internet connection.     Quality badge cannot be shown. Please check your internet connection.     Quality badge cannot be shown. Please check your internet connection.     Quality badge cannot be shown. Please check your internet connection.     Quality badge cannot be shown. Please check your internet connection.   
The AMP belongs to SPHERE-III.006_839 family and has 32 amino acid residues.
Peptide sequence
VASRKLVEIANLFPVCKFKDKDHLKITKVHML
Co-prediction
Predictor
Value
APIN
0.00
AMPScanner2
0.01
AMPlify
0.29
ampir
0.44
amPEPpy
0.56
AI4AMP
0.08
Macrel
0.53

All peptides in the AMPSphere were predicted by Macrel (p > 0.5), but were subsequently run through several additional predictors (shown above)


Distribution
Habitats
1101001000human gutmouse gutpig gutwastewaterdog gutchicken gutcattle gutProgenomescat gutprimate gutactivated sludgebird gutwater associated
# smORF genes (log scale)

Some environment names may be hidden due to space limits.
Use your cursor to zoom in.

Microbial sources
1101001000Phocaeicola vulgatusPhocaeicola dorei43-108 sp001915545RC9 sp000434935Bacteroides caecimurisBacteroides sp003865075Prevotella sp003447235others *
# smORF genes (log scale)

Others *: Also including unknown microbial sources at species level.


Relationships
Gene
Gene sequense
Sample/Genome
Habitat
Microbial source
GMSC10.SMORF.000_001_397_314
TCAAAGCATATGTACTTTGGTAATTTTAAGATGATCTTTGTCCTTGAATTTACAAACAGGAAATAAATTTGCGATTTCTACCAGTTTTCTACTAGCTACCAT
457394.SAMN02463694
Progenomes
Phocaeicola vulgatus
GMSC10.SMORF.000_001_599_911
TCAAAGCATATGTACTTTGGTAATTTTAAGATGATCTTTGTCCTTGAATTTACAAACAGGAAATAAATTTGCGATTTCTACCAGTTTTCTACTAGCTACCAT
469593.SAMN02463762
Progenomes
Phocaeicola vulgatus
GMSC10.SMORF.000_018_479_948
TCAAAGCATATGTACTTTGGTAATTTTAAGATGATCTTTGTCCTTGAATTTACAAACAGGAAATAAATTTGCGATTTCTACCAGTTTTCTACTAGCTACCAT
1339352.SAMN02370951
Progenomes
Phocaeicola vulgatus
GMSC10.SMORF.000_025_054_439
ATGGTAGCTAGTAGAAAGCTGGTAGAAATCGCAAATTTATTTCCTGTTTGTAAATTCAAGGACAAAGATCATCTTAAAATTACCAAAGTACATATGCTTTGA
821.SAMEA3545308
Progenomes
Phocaeicola vulgatus
GMSC10.SMORF.000_025_068_687
TCAAAGCATATGTACTTTGGTAATTTTAAGATGATCTTTGTCCTTGAATTTACAAACAGGAAATAAATTTGCGATTTCTACCAGTTTTCTACTAGCTACCAT
821.SAMEA3545360
Progenomes
Phocaeicola vulgatus
Total 4669
5/page
  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
  • 934
Go to